Sample Sequences

Cedric Notredame, 2001

Purpose of the Exercises

Choose a sequence among the following, and characterize it using bioinformatics tools. Among other things, identify its domain structure, try to predict its putative functions and its putative structure. All the sequences are of similar complexity.

TIPS

Read the documentation!!!!!!!!!
Formulate your questions clearly: What are you asking? How do you intend to find an answer? How do you interpret the results
Do not hesitate to cut and chop your sequences to simplify some analyses

List Of Ressources

Site	Content
PubMed	Pubmed, Blast, Psi-Blast
Infobiogen	SRS
ExPASy	SwissProt, Prosite
E.B.I.	SRS, Blast, ClustalW
EMBnet	Prosite,Blast,ClustalW
PBIL	Blast,ClustalW
123D+	Structural Analysis
DALI	Structure Comparison
Joy	Structural Annotation
Docking 1	Protein Docking
Docking 2	Protein Docking