Getting the best out of T-Coffee |
The following dataset embeds two known structures that have been aligned using a struture alignment package (ref_aln.aln). Using this reference alignment, try to produce with M-Coffee an alignment as accurate as possible. Try to determine whether M-Coffee is more accurate than every indivdual method and if the combination is more than its parts. You can evaluate the accuracy of any M-Coffee alignment by comparing it with the structural reference using the following command:
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